PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00006132_a.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family FAR1
Protein Properties Length: 267aa    MW: 30441.2 Da    PI: 7.6905
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00006132_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR165.91.1e-2080165288
                              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwe 77 
                                       fYn+YA++ GF +r sk ++s  +g  ++  fvCs egkr+++k++ +  + +raetr gC a++k++ +  +gk+ 
  FANhyb_icon00006132_a.1.g00001.1  80 FYNRYAYRFGFGTRLSKAHTS-SSGLLKDILFVCSAEGKRRKDKRS-VYVKFHRAETRFGCGARMKIRYDMsSGKYS 154
                                       ****************99998.8888*****************999.9999*****************9998***** PP

                              FAR1  78 vtkleleHnHe 88 
                                       v +++ +H+H 
  FANhyb_icon00006132_a.1.g00001.1 155 VVEFVADHTHV 165
                                       **********5 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.7E-1680165IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
DAEATSTSDY EISSKMDFGS GIDLNGFVDV ENNEVGGSEE ESEVVRRPSE NAELIHSRMR  60
QELIPVVGME FETEKDALAF YNRYAYRFGF GTRLSKAHTS SSGLLKDILF VCSAEGKRRK  120
DKRSVYVKFH RAETRFGCGA RMKIRYDMSS GKYSVVEFVA DHTHVTSTPS KTHRFRSHRN  180
ISLAQNVQAD MAEDAGLDPK ETLELLSRQA GGRENLGFIP EDYRNYLRSK RTREMKSGDT  240
GGVLEYLQRM QSDNPSFFML YKLMRMI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011461020.11e-141PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBLM5VJS55e-78M5VJS5_PRUPE; Uncharacterized protein (Fragment)
TrEMBLM5Y1935e-78M5Y193_PRUPE; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30451449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-35FAR1-related sequence 5